module Main
where
-import qualified Data.Array.Repa as R (map, reshape)
+import qualified Data.Array.Repa as R (map, force, reshape)
import qualified Data.Array.Repa.IO.BMP as R (writeComponentsToBMP)
import System.Environment (getArgs)
import MRI
import Values (drop_z, zoom_shape)
-zoom_factor :: (Int, Int, Int)
-zoom_factor = (1,2,2)
+main :: IO ()
+main = main2d
+in_file :: FilePath
+in_file = "./data/mri.bin"
-main :: IO ()
-main = do
--- args <- getArgs
--- let color = head args
- let in_file = "./data/mri.bin"
+main3d :: IO ()
+main3d = do
+ (s:_) <- getArgs
+ let scale = read s :: Int
+ let zoom_factor = (scale, scale, scale)
+ let out_file = "output.bin"
+ arr <- read_word16s in_file
+ let arr' = swap_bytes arr
+-- let arrInv = flip_x $ flip_y arr'
+ let arrMRI = R.reshape mri_shape arr'
+ let dbl_data = R.force $ R.map fromIntegral arrMRI
+ let g = make_grid 1 dbl_data
+ let output = zoom g zoom_factor
+ let word16_output = bracket_array output
+ write_word16s out_file word16_output
+
+main2d :: IO ()
+main2d = do
+ (s:_) <- getArgs
+ let scale = read s :: Int
+ let zoom_factor = (1, scale, scale)
let out_file = "output.bmp"
arr <- read_word16s in_file
- let arrBrack = bracket_array arr
- let arrInv = flip_x $ flip_y arrBrack
+ let arr' = swap_bytes arr
+ let arrInv = flip_x $ flip_y arr'
let arrSlice = z_slice 50 arrInv
let arrSlice' = R.reshape mri_slice3d arrSlice
let dbl_data = R.map fromIntegral arrSlice'
let g = make_grid 1 dbl_data
let output = zoom g zoom_factor
+ let arrBrack = bracket_array output
let mri_slice2d = drop_z $ zoom_shape zoom_factor mri_slice3d
- let colors = values_to_colors $ R.reshape mri_slice2d output
+ let colors = values_to_colors $ R.reshape mri_slice2d
+ $ R.map fromIntegral arrBrack
let routput = R.map (\(red, _, _) -> red) colors
let goutput = R.map (\(_, green, _) -> green) colors
let boutput = R.map (\(_, _, blue) -> blue) colors