module Main where import qualified Data.Array.Repa as R import System.Environment (getArgs) import Grid (zoom) import MRI ( flip_x, flip_y, mri_shape, mri_slice3d, read_word16s, round_array, swap_bytes, write_values_slice_to_bitmap, write_word16s, z_slice ) in_file :: FilePath in_file = "./data/mri.bin" main :: IO () main = main3d main3d :: IO () main3d = do (s:_) <- getArgs let scale = read s :: Int let zoom_factor = (scale, scale, scale) let out_file = "output.bin" arr <- read_word16s in_file let arr' = swap_bytes arr let arrMRI = R.reshape mri_shape arr' let dbl_data = R.compute $ R.map fromIntegral arrMRI let output = zoom dbl_data zoom_factor let word16_output = R.compute $ round_array output write_word16s out_file word16_output main2d :: IO () main2d = do (s:_) <- getArgs let scale = read s :: Int let zoom_factor = (1, scale, scale) let out_file = "output.bmp" arr <- read_word16s in_file let arrSlice = R.computeUnboxed $ z_slice 50 $ flip_x $ flip_y $ swap_bytes arr let arrSlice' = R.reshape mri_slice3d arrSlice -- If zoom isn't being inlined we need to extract the slice before hand, -- and convert it to the require formed. let dbl_data = R.compute $ R.map fromIntegral arrSlice' let output = zoom dbl_data zoom_factor let arrSlice0 = R.computeUnboxed $ z_slice 0 output write_values_slice_to_bitmap arrSlice0 out_file